Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCACGGAGAGGCAGG
((((..(((.(((((((((((&))))))))))).)))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363916
GeneSymbolCTCF
Binding site166,190
Score1.0
Seed0
Au0.441
Energy-21.9
Binding len24
Me-11.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
Position5UTR
2D Structure