Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATCTTCAATGCCAGGTG
(((((((((..((.(((((...&))))).))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282427
GeneSymbolPIK3CG
Binding site6051,6071
Score0.923
Seed1
Au0.559
Energy-19.2
Binding len20
Me-8.862
Phylopstem-0.047850688888888916
Phylopflank0.27700557124999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure