Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATGAGTGGTAAATGTAGTGCCTGGGTC
((((((((((((((((((((..&))))))))..........)))).)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282427
GeneSymbolPIK3CG
Binding site6347,6380
Score0.846
Seed1
Au0.588
Energy-18.7
Binding len33
Me-3.938
Phylopstem-0.20321304406250004
Phylopflank0.132440537375
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
Position3UTR
2D Structure