Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTACAGGTGCCCACCACCATGCCAGGC
.((((((((((..(((((((((&))))))))).))..........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282438
GeneSymbolBLOC1S2
Binding site2194,2225
Score0.846
Seed1
Au0.559
Energy-18.8
Binding len31
Me-8.429
Phylopstem5.2933755
Phylopflank3.279905641249999
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure