Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTGTGTATGTAGGA
.(((.(((((((..((((....&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282438
GeneSymbolBLOC1S2
Binding site1219,1236
Score0.846
Seed0
Au0.603
Energy-17.0
Binding len17
Me-10.058
Phylopstem-0.08313681428571432
Phylopflank0.06919285074999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure