Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACATTAGCAGCTGGGAA
((.(((((((.(((((.....&)))))....))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282438
GeneSymbolBLOC1S2
Binding site1348,1368
Score0.846
Seed0
Au0.485
Energy-17.9
Binding len20
Me-8.32
Phylopstem0.58558
Phylopflank-0.06848448137499996
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure