Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGAAAGAGGAGGGAAATGATTATGACACTCGAAGTGAGGCCAGTGA
(((((((((((((((((.....&)))))))).).............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330698
GeneSymbolYTHDC1
Binding site1104,1152
Score0.923
Seed1
Au0.529
Energy-22.4
Binding len48
Me-3.938
Phylopstem-0.07296807234042554
Phylopflank-0.12215927125
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end3
PositionCDS
2D Structure