Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGAGAGGCTAGTA
.((((((..((((((((((...&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330698
GeneSymbolYTHDC1
Binding site4389,4406
Score0.877
Seed1
Au0.632
Energy-21.1
Binding len17
Me-7.163
Phylopstem5.686561
Phylopflank5.394659095000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure