Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGACCAGCAGAACTGCAAG
(((((((((((((((.((((.&))))))))).))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282455
GeneSymbolCHRNA2
Binding site1100,1123
Score0.923
Seed1
Au0.5
Energy-23.9
Binding len23
Me-4.171
Phylopstem-0.2981251555555555
Phylopflank-0.36939944999999996
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure