Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGTCATCCGGCGGCTGCC
..((((((((((.((.(((((&)))))...)).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282455
GeneSymbolCHRNA2
Binding site1300,1323
Score0.846
Seed1
Au0.382
Energy-23.1
Binding len23
Me-6.479
Phylopstem-0.18565143636363635
Phylopflank-0.34216737500000005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure