Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTCTCAGCCACAGGGAGCTGCAT
.(((((((.((((((..((..&))..)))))....).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282498
GeneSymbolZNF343
Binding site2340,2363
Score0.846
Seed1
Au0.397
Energy-20.4
Binding len23
Me-5.083
Phylopstem-0.6085348428571429
Phylopflank0.28490457625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure