Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACAAGCTGACTTGGAATTGTGTGCTGCTTGCTGTT
..((((((((((((.((((..&.)))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282500
GeneSymbolTTC1
Binding site974,1014
Score0.821
Seed1
Au0.529
Energy-19.1
Binding len20
Me-5.692
Phylopstem5.085923046153846
Phylopflank2.7521512475000005
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure