Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCCCCACCGACAGACTGCAGCTGCGT
.(((((((((((((....(((&.)))....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282506
GeneSymbolMUC20
Binding site2216,2249
Score0.923
Seed1
Au0.368
Energy-27.3
Binding len22
Me-4.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure