Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCCACAGCCGGCACCACAGAGTCAGCTGCAC
.(((((((((((((((.(((.&)))....)))))))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282506
GeneSymbolMUC20
Binding site1469,1504
Score0.846
Seed1
Au0.338
Energy-22.2
Binding len35
Me-3.793
Phylopstem-0.016287144444444467
Phylopflank-0.20212991624999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure