Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGT
.(((((((.(((((((.....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363943
GeneSymbolAMOTL2
Binding site1648,1681
Score0.846
Seed1
Au0.353
Energy-23.6
Binding len17
Me-4.85
Phylopstem-1.112116714285714
Phylopflank0.13443319124999992
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure