Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCGGGGCCCTCAGGAAGGAGGGAGTTGGCAGCGGGGGCTGCAGC
((((((((.(.(((((.....&.))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282535
GeneSymbolPNMA3
Binding site3339,3386
Score0.846
Seed1
Au0.338
Energy-22.8
Binding len18
Me-7.819
Phylopstem0.02516279999999997
Phylopflank-0.15098594499999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure