Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTCCAGCA
.....((((.(((((((((((&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282536
GeneSymbolPPFIA2
Binding site2770,2787
Score0.846
Seed0
Au0.574
Energy-20.0
Binding len17
Me-14.908
Phylopstem6.220141727272727
Phylopflank5.87996851125
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure