Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAGCTGCAATTTTTGCTAAGAGTGAGCTGCAGC
((((((((((((((((..(((&))).))))))))).................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282562
GeneSymbolEYA3
Binding site2041,2079
Score0.846
Seed1
Au0.5
Energy-22.0
Binding len38
Me-3.938
Phylopstem0.27797995454545454
Phylopflank0.013426008749999965
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
Position3UTR
2D Structure