Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGCGTTTGCTGCTGCAT
.((((((.((((.((((((((&))).))))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282564
GeneSymbolMACO1
Binding site991,1013
Score0.846
Seed1
Au0.412
Energy-19.7
Binding len22
Me-7.396
Phylopstem5.59417888888889
Phylopflank5.273312892499998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure