Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAA
(((((((((((.((...((((&.)))).....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282567
GeneSymbolZCCHC17
Binding site349,395
Score0.808
Seed1
Au0.471
Energy-19.9
Binding len25
Me-8.253
Phylopstem2.7153272363636365
Phylopflank4.35329776125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure