Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAAGAAGTGTGGCTGTAAA
(((((((((((.((...((((&)))).....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282569
GeneSymbolZCCHC17
Binding site562,586
Score0.846
Seed1
Au0.559
Energy-19.7
Binding len24
Me-8.253
Phylopstem4.0452639090909095
Phylopflank4.1399180300000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure