Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGGCAATTAATGCAGCAGTTGCGAT
((((((((((((((((.(((.&)))..))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282603
GeneSymbolPTGES3
Binding site928,956
Score1.0
Seed1
Au0.588
Energy-20.8
Binding len28
Me-3.938
Phylopstem2.5671123636363635
Phylopflank3.0153537255000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure