Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGGCAATTAATGCAGCAGTTGCGAT
((((((((((((((((.(((.&)))..))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282604
GeneSymbolPTGES3
Binding site1076,1104
Score1.0
Seed1
Au0.588
Energy-20.8
Binding len28
Me-3.938
Phylopstem2.1635632727272727
Phylopflank2.3687674525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure