Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAACTTCAATCAAGGAAAAATAGAGCAACTGTACAGCAGGCAGA
((((.(((((((((((.....&.)))))))..))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282615
GeneSymbolBEST3
Binding site445,493
Score0.923
Seed0
Au0.632
Energy-17.7
Binding len21
Me-8.057
Phylopstem0.05095238461538462
Phylopflank0.08139621250000001
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure