Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGGCTGCAGCTGTG
..((((((((((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363979
GeneSymbolMCPH1
Binding site1186,1204
Score0.923
Seed1
Au0.382
Energy-23.8
Binding len18
Me-5.925
Phylopstem-0.07142054999999999
Phylopflank0.20993720374999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure