Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAGCTGGACAGGCTGGGCAACATCTGGAGACCGTGGCTGCAGC
((((((((((((((...((((&.))))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282631
GeneSymbolARSL
Binding site1620,1669
Score0.846
Seed1
Au0.324
Energy-26.5
Binding len23
Me-4.906
Phylopstem-0.2180981
Phylopflank0.9113586712500003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure