Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTAACTGTAATTTCCTGAGGCTGCAT
.((((((((((((((((((((&)))))))))))))..........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282640
GeneSymbolSUSD1
Binding site2215,2246
Score0.923
Seed1
Au0.544
Energy-23.3
Binding len31
Me-3.793
Phylopstem2.0269961999999997
Phylopflank1.44937958
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure