Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGATGCTGATGGATACGTGGCTGCAGA
(((((((((((..(.((.(((&.)))..)).)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282640
GeneSymbolSUSD1
Binding site1997,2029
Score0.923
Seed1
Au0.5
Energy-21.0
Binding len24
Me-9.309
Phylopstem0.5434101090909091
Phylopflank0.7371063575000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure