Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTTGACTGCAGCA
.....((((((((((...(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282645
GeneSymbolPRKCQ
Binding site2009,2026
Score0.846
Seed0
Au0.574
Energy-18.0
Binding len17
Me-13.899
Phylopstem5.490002970000001
Phylopflank3.4306766560875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure