Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACCAAAAGCAGGCTGCAGG
((((((((((..(((..(((.&)))...)))..)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363980
GeneSymbolMCPH1
Binding site977,1000
Score0.846
Seed1
Au0.515
Energy-20.0
Binding len23
Me-10.342
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure