Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATGTGGAAAGAGGAGCTGGGACCGCGGCGAGCAGC
((((.(((((((((....(((&.)))..)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282652
GeneSymbolSTIP1
Binding site2354,2393
Score0.846
Seed0
Au0.338
Energy-22.2
Binding len22
Me-9.025
Phylopstem1.2907954444444445
Phylopflank1.9168532449999993
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure