Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCCGAGCTGA
...(((((..((((((((((.&))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282661
GeneSymbolMRTFA
Binding site488,506
Score1.0
Seed0
Au0.368
Energy-25.1
Binding len18
Me-8.813
Phylopstem0.14852720000000003
Phylopflank0.7867623750000001
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure