Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGCTAAAATCAAAAACAAATGCCAGGA
.((((((((.((((((((....&))))))))................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330701
GeneSymbolAGTPBP1
Binding site895,928
Score0.846
Seed1
Au0.574
Energy-20.5
Binding len33
Me-5.036
Phylopstem3.82325
Phylopflank5.13285135
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end4
PositionCDS
2D Structure