Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGGCGGCTGCAGCA
.....(((((((((((..(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282664
GeneSymbolMICAL2
Binding site2668,2686
Score0.923
Seed0
Au0.382
Energy-20.5
Binding len18
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure