Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAACTGCTTTTCAGCAGTGGACTGCAGG
(((((((((((((((..((((&))))..)))))))...........)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363989
GeneSymbolCAMK2A
Binding site4184,4218
Score0.846
Seed1
Au0.456
Energy-22.1
Binding len34
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end6
Position3UTR
2D Structure