Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTCCAGCCGTAGCTTGGGCT
..(((((((((((((.(((((&)))))..)))))))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282665
GeneSymbolMICAL2
Binding site2223,2247
Score0.923
Seed1
Au0.485
Energy-21.9
Binding len24
Me-5.19
Phylopstem1.176179825
Phylopflank2.0266005637499998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure