Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCCTGCGCAGCTGCC
..((((((((((((((..(((&)))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282670
GeneSymbolFAAP20
Binding site3292,3314
Score0.846
Seed1
Au0.279
Energy-23.9
Binding len22
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure