Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCTGTGGAGGGTGCCGCGGCCCTGCGCAGCTGCC
..((((((((((((((..(((&.)))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282673
GeneSymbolFAAP20
Binding site427,465
Score0.846
Seed1
Au0.279
Energy-24.1
Binding len23
Me-4.957
Phylopstem1.7259817194444442
Phylopflank2.3313428731249988
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure