Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATGTGCCAGT
..(((((((...((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282675
GeneSymbolPAMR1
Binding site957,971
Score0.846
Seed1
Au0.544
Energy-17.0
Binding len14
Me-12.371
Phylopstem2.3749147142857145
Phylopflank3.28383924
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure