Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTGATATCTGCACTGCAGAGACAGGAGGCATCGCGGCTGTG
..((((((((((.(((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282675
GeneSymbolPAMR1
Binding site2404,2449
Score1.0
Seed1
Au0.382
Energy-19.9
Binding len15
Me-6.246
Phylopstem4.1526774
Phylopflank4.821741787499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure