Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGAACTTGGCTGTGCCAGGG
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282676
GeneSymbolPAMR1
Binding site1957,1978
Score0.846
Seed1
Au0.5
Energy-16.4
Binding len11
Me-13.079
Phylopstem4.964731811111111
Phylopflank4.02602384625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure