Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAAGTGTGCCTGCT
..((((.((((.(((((((((&))))))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282676
GeneSymbolPAMR1
Binding site465,485
Score0.846
Seed0
Au0.441
Energy-19.7
Binding len20
Me-9.847
Phylopstem-0.41126766666666664
Phylopflank-0.004949517499999917
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure