Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATGGAATGCTGCT
..(((((......((((((((&))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282678
GeneSymbolPEX1
Binding site3291,3311
Score0.846
Seed0
Au0.5
Energy-19.8
Binding len20
Me-17.03
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure