Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTATGACCGTGCTGTAGA
(((((((.((((((((((...&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282682
GeneSymbolSH3YL1
Binding site493,511
Score0.923
Seed1
Au0.574
Energy-20.8
Binding len18
Me-6.251
Phylopstem0.46403239999999996
Phylopflank-0.13586319750000003
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure