Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGT
(((((((((((((((.((((.&))))...)))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282685
GeneSymbolKCTD17
Binding site161,200
Score0.846
Seed1
Au0.309
Energy-24.1
Binding len39
Me-4.171
Phylopstem4.3261078064516125
Phylopflank4.345658285
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure