Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTCCCAACCTGGCAGTTGCAT
.((((((((((((((..((((&))))..)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282689
GeneSymbolSECISBP2
Binding site1179,1202
Score0.923
Seed1
Au0.529
Energy-20.8
Binding len23
Me-4.026
Phylopstem1.863023875
Phylopflank1.5577825500000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure