Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCAGATTCAGGGATTACTGCAGC
((((((((((((((((.....&))))))))))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282690
GeneSymbolSECISBP2
Binding site2054,2083
Score0.923
Seed1
Au0.515
Energy-22.0
Binding len29
Me-3.938
Phylopstem5.030022428571428
Phylopflank2.0828906875
Longest consecutive pairings10
Position of longest consecutive pairings19
Pairings in 3prime end3
PositionCDS
2D Structure