Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCTGTGACAGTTGCAGT
(((((((((((...(((((((&)))))))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282703
GeneSymbolFAM107B
Binding site807,830
Score0.846
Seed1
Au0.456
Energy-22.6
Binding len23
Me-9.43
Phylopstem0.23432305749999996
Phylopflank0.11700077574999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure