Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGATACTGGAGCTGCAGG
((((((((.((((..(((((.&)))))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282707
GeneSymbolPDIA6
Binding site1181,1202
Score0.846
Seed1
Au0.515
Energy-25.2
Binding len21
Me-6.586
Phylopstem7.243645000000001
Phylopflank4.338586399999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure