Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAAGCCAAGCGGCTGCAGT
((((((((((((((....(((&)))...))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282714
GeneSymbolFAM107A
Binding site966,989
Score0.904
Seed1
Au0.397
Energy-22.2
Binding len23
Me-4.906
Phylopstem-0.359161655
Phylopflank-0.11724446274999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure